Thapar University in all aspects is a lot better than JIIT. But I am not quite aware of the EIC branch. You can interact with ex-students of the institute online, to get a better idea about the course. If you think it will be a better choice, go for it.
| Categories | EIC at Thapar University | CSE at JIIT Noida | 
| Course Fee | 13.23 lakh | 9.22 lakh | 
| Highest CTC | 18 LPA | 12-16 LPA | 
| Average CTC | 6 LPA | 4-5 LPA | 
| Recruiting Companies | TCS, Tech Mahindra, Phillips, L&T, etc. | Amazon, Adobe, Morgan Stanley, ZS Associates, etc. | 
Thapar University will be a much better choice than JIIT, as it is popular among students and professionals as well. Any branch at Thapar will prove to be more valuable than CSE at JIIT Noida.